Alexandrov, O. S. (2025). Minisatellites in genomes of Citrus crops and the possibility of their use for molecular marking. In: Abstracts of 8th International Scientific Conference “Plant Genetics, Genomics, Bioinformatics and Biotechnology”, July 2-5, Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk State University, Novosibirsk, Russia. pp: 40.
Alexandrov, O. S. and Karlov, G. I. (2016). Molecular cytogenetic analysis and genomic organization of major DNA repeats in castor bean (Ricinus communis L.). Mol. Genet. Genomics 291: 775-87.
Alexandrov, O. S. and Romanov, D. V. (2025). Minisatellite isolation and minisatellite molecular marker development in Citrus limon (L.) Osbeck. Data 10: doi:10.3390/ data10010002.
Cañestro, C., Gonzàlez-Duarte, R. and Albalat, R. (2002). Minisatellite instability at the Adh locus reveals somatic polymorphism in amphioxus. Nucleic Acids Res. 30: 2871-76.
Ezra, D. and Carmi, N. (2025). Advancing Citrus breeding: next- genereation tools for resistance, flavor and health. Horticulturae 11: doi:10.3390/horticulturae11091011.
Gao, Y., Xu, J., Li, Z., Zhang, Y., Riera, N., Xiong, Z., Ouyang, Z., Liu, X., Lu, Z., Seymour, D., Zhong, B. and Wang, N. (2023). Citrus genomic resources unravel putative genetic determinants of Huanglongbing pathogenicity. iScience 26: doi:10.1016/j.isci.2023.106024.
Hartati, S., Roviqowati, F. and Muliawati, E. S. (2025). Genetic diversity of Phalaenopsis species based on random amplified polymorphic DNA (RAPD) markers. Res. Crop. 26: 505-12.
Khuzhakhmetova, A. and Kuzmin, P. (2025). ISSR analysis for the evaluation of shrub polymorphism in the genus Corylus L. Res. Crop. 26: 175-80.
Liao, X., Zhu, W., Zhou, J. Li, H., Xu, X., Zhang, B. and Gao, X. (2023). Repetitive DNA sequence detection and its role in the human genome. Commun. Biol. 6: doi:10.1038/s42003-023-05322-y.
Mukhametzyanov, R. R., Brusenko, S. V., Khezhev, A. M., Kelemetov, E. M. and Kirillova, S. S. (2024). Changing the global production and trade of Citrus fruits. In: Sustainable development of the agrarian economy based on digital technologies and smart innovations (Eds. Popkova, E. G., Bogoviz, A. V., Sergi, B. S., Kaurova, O. V. and Maloletko, A. N). Springer Nature Switzerland AG, Cham, Switzerland. pp: 19-24.
Shimizu, T. and Nonaka, K. (2025). Genomics unlocks the potential of genetic resources for Citrus breeding. Breed. Sci. 75: 21-33.
Singh, J., Sharma, A., Sharma, V., Gaikwad, P. N., Sidhu, G. S., Kaur, G., Kaur, N., Jindal, T., Chhuneja, P. and Rattanpal, H. S. (2023). Comprehensive genome-wide identification and transferability of chromosome-specific highly variable microsatellite markers from Citrus species. Sci. Rep. 13: doi:10.1038/s41598-023-37024-0.
Thomson, N., Sebaihia, M., Cerdeño-Tárraga, A., Bentley, S., Crossman, L. and Parkhill, J. (2003). The value of comparison. Nat. Rev. Microbiol. 1: 11-2.
Wang, L., Huang, Y., Liu, Z., He, J., Jiang, X., He, F., Lu, Z., Yang, S., Chen, P., Yu, H., Zeng, B., Ke, L., Xie, Z., Larkin, R. M., Jiang, D., Ming, R., Buckler, E. S., Deng, X. and Xu, Q. (2021). Somatic variations led to the selection of acidic and acidless orange cultivars. Nat. Plants 7: 954-65.
Wang, N., Chen, P., Xu, Y., Guo, L., Li, X., Yi, H., Larkin, R. M., Zhou, Y., Deng, X. and Xu, Q. (2024). Phased genomics reveals hidden somatic mutations and provides insight into fruit development in sweet orange. Hortic. Res. 11: doi:10.1093/hr/uhad268.
Wang, X. and Wang, L. (2016). GMATA: An integrated software package for genome-scale SSR mining, marker development and viewing. Front. Plant Sci. 7: doi:10.3389/fpls.2016.01350.
Wu, B., Yu, Q., Deng, Z., Duan, Y., Luo, F. and Gmitter, F. (2023). A chromosome-level phased genome enabling allele-level studies in sweet orange: a case study on Citrus Huanglongbing tolerance. Hortic. Res. 10: doi:10.1093/hr/uhac247.
Wu, G. A., Prochnik, S., Jenkins, J., Salse, J., Hellsten, U., Murat, F., Perrier, X., Ruiz, M., Scalabrin, S., Terol, J., Takita, M. A., Labadie, K., Poulain, J., Couloux, A., Jabbari, K., Cattonaro, F., Del Fabbro, C., Pinosio, S., Zuccolo, A., Chapman, J., Grim-wood, J., Tadeo, F. R., Estornell, L. H., Muñoz-Sanz, J. V., Ibanez, V., Herrero-Ortega, A., Aleza, P., Pérez-Pérez, J., Ramón, D., Brunel, D., Luro, F., Chen, C., Farmerie, W. G., Desany, B., Kodira, C., Mohiuddin, M., Harkins, T., Fredrikson, K., Burns, P., Lomsadze, A., Borodovsky, M., Reforgiato, G., Freitas-Astúa, J., Quetier, F., Navarro, L., Roose, M., Wincker, P., Schmutz, J., Morgante, M., Machado, M.A., Talon, M., Jaillon, O., Ollitrault, P., Gmitter, F. and Rokhsar, D. (2014). Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during Citrus domestication. Nat. Biotechnol. 32: 656-62.
Wu, G. A., Terol, J., Ibanez, V., López-García, A., Pérez-Román, E., Borredá, C., Domingo, C., Tadeo, F. R., Carbonell-Caballero, J., Alonso, R., Curk, F., Du, D., Ollitrault, P., Roose, M. L., Dopazo, J., Gmitter, F.G., Rokhsar, D.S. and Talon M. (2018). Genomics of the origin and evolution of Citrus. Nature 554: 311-16.
Xiong, Z., Yin, H., Wang, N., Han, G. and Gao, Y. (2024). Chromosome-level genome assembly of navel orange cv. Gannanzao (Citrus sinensis Osbeck cv. Gannanzao). G3 (Bethesda) 14: doi:10.1093/g3journal/jkad268.
Yang, L., Deng, H., Wang, M., Li, S., Wang, W., Yang, H., Pang, C., Zhong, Q., Sun, Y. and Hong, L. (2024). A high-quality chromosome-scale genome assembly of blood orange, an important pigmented sweet orange variety. Sci. Data 11: doi:10.1038/s41597-024-03313-0.
Alexandrov, O. S. and Karlov, G. I. (2016). Molecular cytogenetic analysis and genomic organization of major DNA repeats in castor bean (Ricinus communis L.). Mol. Genet. Genomics 291: 775-87.
Alexandrov, O. S. and Romanov, D. V. (2025). Minisatellite isolation and minisatellite molecular marker development in Citrus limon (L.) Osbeck. Data 10: doi:10.3390/ data10010002.
Cañestro, C., Gonzàlez-Duarte, R. and Albalat, R. (2002). Minisatellite instability at the Adh locus reveals somatic polymorphism in amphioxus. Nucleic Acids Res. 30: 2871-76.
Ezra, D. and Carmi, N. (2025). Advancing Citrus breeding: next- genereation tools for resistance, flavor and health. Horticulturae 11: doi:10.3390/horticulturae11091011.
Gao, Y., Xu, J., Li, Z., Zhang, Y., Riera, N., Xiong, Z., Ouyang, Z., Liu, X., Lu, Z., Seymour, D., Zhong, B. and Wang, N. (2023). Citrus genomic resources unravel putative genetic determinants of Huanglongbing pathogenicity. iScience 26: doi:10.1016/j.isci.2023.106024.
Hartati, S., Roviqowati, F. and Muliawati, E. S. (2025). Genetic diversity of Phalaenopsis species based on random amplified polymorphic DNA (RAPD) markers. Res. Crop. 26: 505-12.
Khuzhakhmetova, A. and Kuzmin, P. (2025). ISSR analysis for the evaluation of shrub polymorphism in the genus Corylus L. Res. Crop. 26: 175-80.
Liao, X., Zhu, W., Zhou, J. Li, H., Xu, X., Zhang, B. and Gao, X. (2023). Repetitive DNA sequence detection and its role in the human genome. Commun. Biol. 6: doi:10.1038/s42003-023-05322-y.
Mukhametzyanov, R. R., Brusenko, S. V., Khezhev, A. M., Kelemetov, E. M. and Kirillova, S. S. (2024). Changing the global production and trade of Citrus fruits. In: Sustainable development of the agrarian economy based on digital technologies and smart innovations (Eds. Popkova, E. G., Bogoviz, A. V., Sergi, B. S., Kaurova, O. V. and Maloletko, A. N). Springer Nature Switzerland AG, Cham, Switzerland. pp: 19-24.
Shimizu, T. and Nonaka, K. (2025). Genomics unlocks the potential of genetic resources for Citrus breeding. Breed. Sci. 75: 21-33.
Singh, J., Sharma, A., Sharma, V., Gaikwad, P. N., Sidhu, G. S., Kaur, G., Kaur, N., Jindal, T., Chhuneja, P. and Rattanpal, H. S. (2023). Comprehensive genome-wide identification and transferability of chromosome-specific highly variable microsatellite markers from Citrus species. Sci. Rep. 13: doi:10.1038/s41598-023-37024-0.
Thomson, N., Sebaihia, M., Cerdeño-Tárraga, A., Bentley, S., Crossman, L. and Parkhill, J. (2003). The value of comparison. Nat. Rev. Microbiol. 1: 11-2.
Wang, L., Huang, Y., Liu, Z., He, J., Jiang, X., He, F., Lu, Z., Yang, S., Chen, P., Yu, H., Zeng, B., Ke, L., Xie, Z., Larkin, R. M., Jiang, D., Ming, R., Buckler, E. S., Deng, X. and Xu, Q. (2021). Somatic variations led to the selection of acidic and acidless orange cultivars. Nat. Plants 7: 954-65.
Wang, N., Chen, P., Xu, Y., Guo, L., Li, X., Yi, H., Larkin, R. M., Zhou, Y., Deng, X. and Xu, Q. (2024). Phased genomics reveals hidden somatic mutations and provides insight into fruit development in sweet orange. Hortic. Res. 11: doi:10.1093/hr/uhad268.
Wang, X. and Wang, L. (2016). GMATA: An integrated software package for genome-scale SSR mining, marker development and viewing. Front. Plant Sci. 7: doi:10.3389/fpls.2016.01350.
Wu, B., Yu, Q., Deng, Z., Duan, Y., Luo, F. and Gmitter, F. (2023). A chromosome-level phased genome enabling allele-level studies in sweet orange: a case study on Citrus Huanglongbing tolerance. Hortic. Res. 10: doi:10.1093/hr/uhac247.
Wu, G. A., Prochnik, S., Jenkins, J., Salse, J., Hellsten, U., Murat, F., Perrier, X., Ruiz, M., Scalabrin, S., Terol, J., Takita, M. A., Labadie, K., Poulain, J., Couloux, A., Jabbari, K., Cattonaro, F., Del Fabbro, C., Pinosio, S., Zuccolo, A., Chapman, J., Grim-wood, J., Tadeo, F. R., Estornell, L. H., Muñoz-Sanz, J. V., Ibanez, V., Herrero-Ortega, A., Aleza, P., Pérez-Pérez, J., Ramón, D., Brunel, D., Luro, F., Chen, C., Farmerie, W. G., Desany, B., Kodira, C., Mohiuddin, M., Harkins, T., Fredrikson, K., Burns, P., Lomsadze, A., Borodovsky, M., Reforgiato, G., Freitas-Astúa, J., Quetier, F., Navarro, L., Roose, M., Wincker, P., Schmutz, J., Morgante, M., Machado, M.A., Talon, M., Jaillon, O., Ollitrault, P., Gmitter, F. and Rokhsar, D. (2014). Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during Citrus domestication. Nat. Biotechnol. 32: 656-62.
Wu, G. A., Terol, J., Ibanez, V., López-García, A., Pérez-Román, E., Borredá, C., Domingo, C., Tadeo, F. R., Carbonell-Caballero, J., Alonso, R., Curk, F., Du, D., Ollitrault, P., Roose, M. L., Dopazo, J., Gmitter, F.G., Rokhsar, D.S. and Talon M. (2018). Genomics of the origin and evolution of Citrus. Nature 554: 311-16.
Xiong, Z., Yin, H., Wang, N., Han, G. and Gao, Y. (2024). Chromosome-level genome assembly of navel orange cv. Gannanzao (Citrus sinensis Osbeck cv. Gannanzao). G3 (Bethesda) 14: doi:10.1093/g3journal/jkad268.
Yang, L., Deng, H., Wang, M., Li, S., Wang, W., Yang, H., Pang, C., Zhong, Q., Sun, Y. and Hong, L. (2024). A high-quality chromosome-scale genome assembly of blood orange, an important pigmented sweet orange variety. Sci. Data 11: doi:10.1038/s41597-024-03313-0.
